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  "Title": "Publication Quality Phylogenetic Tree Plots",
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  "License": "GPL-2",
  "URL": "https://github.com/uclahs-cds/package-CancerEvolutionVisualization",
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      "title": "Colour scheme vector",
      "topics": [
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      "topics": [
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        "Ex. 1.4: Branch Scaling",
        "Ex. 1.5: Y-Axis Labels",
        "Ex. 1.6: Axis Tick Placement",
        "Ex. 1.7: Scale Bars",
        "Ex. 1.8: Visualizing Cellular Prevalence",
        "Customizing Node Arrangement",
        "Ex. 2.1: Node Spread",
        "Ex. 2.2: Node Angles",
        "Phylogenetic Tree Modes",
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        "Ex. 3.2: Dendrogram Mode",
        "Customizing Phylogenetic Tree Aesthetics",
        "Supported Aesthetic Input Columns",
        "Line Types",
        "Ex. 4.1: Styled Tree",
        "Ex. 4.2: Nodeless Tree",
        "Text Annotations",
        "Ex. 5.1: Edge annotations",
        "Ex. 5.2: Specifying Text Colour and Style",
        "Additional Plot Parameters",
        "Ex. 6.1: Adding the Normal Node",
        "Ex. 6.2: Horizontal Padding Between Tree and Axes",
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        "CCF Distribution Visualization",
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        "Ex. 7.2: CCF Distribution Across subclones",
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        "Ex. 7.4: Clone-Genome Distribution Plot"
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